BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021E08SP1|AL427778
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1517 1495 0.0
>3x_Contig1517
Length = 8289
Score = 1495 bits (721), Expect = 0.0
Identities = 838/918 (91%), Gaps = 1/918 (0%)
Strand = Plus / Minus
Query: 1 tatcaaatacgagatgactatttaaatctattctccaagacaatgtttgaacagaaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7348 tatcaaatacgagatgactatttaaatctattctccaagacaatgtttgaacagaaggga 7289
Query: 61 ttcgctgatgatctaaccgaggggaaattttccttcccaataattcatgccatagctagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7288 ttcgctgatgatctaaccgaggggaaattttccttcccaataattcatgccatagctagt 7229
Query: 121 tcaaggaatgaaggtgataacgatgattatgtccttaaaacagttttatcaaggccttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7228 tcaaggaatgaaggtgataacgatgattatgtccttaaaacagttttatcaaggccttca 7169
Query: 181 gagattcgtactaaagagaaattgctcagttattkggagcaccagacaaagtctggtgaa 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 7168 gagattcgtactaaagagaaattgctcagttatttggagcaccagacaaagtctggtgaa 7109
Query: 241 tataccagacaggttatccaaactcttgcacaaaaagttactactgaattggttccaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7108 tataccagacaggttatccaaactcttgcacaaaaagttactactgaattggttccaaag 7049
Query: 301 gagctttctkcagtgaaagakatakggtcgaaactctcccagttagactaattctattat 360
||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 7048 gagctttcttcagttaaagatatattgtcgaaactctcccagttagactaattctattat 6989
Query: 361 rtkgattacgaccatcttatatatkarkkcattagcttcctcatcattatkkakkkkkrt 420
| ||||||||||||||||||||| | ||||||||||||||||||||| | |
Sbjct: 6988 attgattacgaccatcttatatattaattcattagcttcctcatcattatttatttttat 6929
Query: 421 kagckaarksacgakatatatcarakatactttgcatatcactaaccnncaaggccncga 480
||| || |||| |||||||| | ||||||||||||||||||||| |||| || |||
Sbjct: 6928 tagctaaatcacgatatatatcaaatatactttgcatatcactaaccttcaagtcctcga 6869
Query: 481 attnanrakccttgkrcckgcgccaatcgggagcrgggccckcgggaacckcgrkgskkg 540
||| | | ||||| || | |||||||| ||| || ||| ||| |||| || | |
Sbjct: 6868 atttataatccttgtaccttctccaatcggtagcaggaccctcggtaacctcgatgcttg 6809
Query: 541 ggagsgggacckgkrkckgkgckasakgcgggggkggkggtggcggtggcggggkataag 600
| || || ||| | | | || | | |||| || || |||||||||||||||| |||||
Sbjct: 6808 gtagcggtacctgtatctgtgctacatgcggtggtggtggtggcggtggcggggtataag 6749
Query: 601 tgtkgakgcgacccatcaagtktctaaraccagaatcaataacattaccaacagatakgr 660
| | || |||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 6748 ttttgatgcgacccatcaagtttctaaaaccagaatcaataacattaccaacagatatta 6689
Query: 661 rrtcagaaagagagttagaccttttgaaatccggtataaatgactcctctgtcgctagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6688 aatcagaaagagagttagaccttttgaaatccggtataaatgactcctctgtcgctagag 6629
Query: 721 gaagtttcacttgttcactgatagactccaaatgcggaagttttaattcatcagtgtgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6628 gaagtttcacttgttcactgatagactccaaatgcggaagttttaattcatcagtgtgtt 6569
Query: 781 ggcaatatgttattatatccttagttgtcaacgagtcaatgaaagatatcgcggcttcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6568 ggcaatatgttattatatccttagttgtcaacgagtcaatgaaagatatcgcggcttcaa 6509
Query: 841 aattcgtagtgacatataattctttctctttc-amcttcgatggaatctgaaaagcttga 899
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 6508 aattcgtagtgacatataattctttctctttcaaccttcgatggaatctgaaaagcttga 6449
Query: 900 tgaactggaggttcaaaa 917
||||||||||||||||||
Sbjct: 6448 tgaactggaggttcaaaa 6431
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4843
Number of Sequences: 1807
Number of extensions: 4843
Number of successful extensions: 102
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.3 bits)
S2: 48 (100.0 bits)